Publications

Toenshoff, E. R., Fields, P. D., Bourgeois, Y. X. und Ebert, D. (2018) «The End of a 60-year Riddle: Identification and Genomic Characterization of an Iridovirus, the Causative Agent of White Fat Cell Disease in Zooplankton», G3-Genes Genomes Genetics. Genetics Society of America, 8(4), S. 1259-1272. doi: 10.1534/g3.117.300429.   edoc | Open Access
Sullam, K. E., Pichon, S., Schaer, T. M. M. und Ebert, D. (2018) «The Combined Effect of Temperature and Host Clonal Line on the Microbiota of a Planktonic Crustacean», Microbial Ecology. Springer, 76(2), S. 506-517. doi: 10.1007/s00248-017-1126-4.   edoc
Sison-Mangus, M. P., Metzger, C. M. J. A. und Ebert, D. (2018) «Host genotype-specific microbiota do not influence the susceptibility of D. magna to a bacterial pathogen», Scientific Reports. Nature Research, 8(9407), S. 1-10. doi: 10.1038/s41598-018-27681-x.   edoc | Open Access
Preiswerk, D., Walser, J.-C. und Ebert, D. (2018) «Temporal dynamics of microbiota before and after host death», Isme Journal. Springer nature, 12(8), S. 2076-2085. doi: 10.1038/s41396-018-0157-2.   edoc | Open Access
Gerber, N., Kokko, H., Ebert, D. und Booksmythe, I. (2018) «Daphnia invest in sexual reproduction when its relative costs are reduced», Proceedings of the Royal Society B-Biological Sciences. The Royal Society, 285(1871), S. 1-9. doi: 10.1098/rspb.2017.2176.   edoc
Fields, P. D., Obbard, D. J., McTaggart, S. J., Galimov, Y., Little, T. J. und Ebert, D. (2018) «Mitogenome phylogeographic analysis of a planktonic crustacean», Molecular Phylogenetics and Evolution. Elsevier, 129, S. 138-148. doi: 10.1016/j.ympev.2018.06.028.   edoc
Ebert, D. (2018) «Open questions: what are the genes underlying antagonistic coevolution?», BMC Biology. BMC, 16(114), S. 1. doi: 11410.1186/s12915-018-0583-7.   edoc | Open Access
Ebert, B., Ebert, D., Koebsch, K., Maser, E. und Kisiela, M. (2018) «Carbonyl reductases from Daphnia are regulated by redox cycling compounds», Febs Journal. Wiley, 285(15), S. 2869-2887. doi: 10.1111/febs.14578.   edoc
Booksmythe, I., Gerber, N., Ebert, D. und Kokko, H. (2018) «Daphnia females adjust sex allocation in response to current sex ratio and density», Ecology Letters. Wiley, 21(5), S. 629-637. doi: 10.1111/ele.12929.   edoc
Andras, J. P., Fields, P. D. und Ebert, D. (2018) «Spatial population genetic structure of a bacterial parasite in close coevolution with its host», Molecular Ecology. Wiley, 27(6), S. 1371-1384. doi: 10.1111/mec.14545.   edoc
Mushegian, A. A., Walser, J. C., Sullam, K. E. und Ebert, D. (2018) «The microbiota of diapause: how host-microbe associations are formed after dormancy in an aquatic crustacean», Journal of Animal Ecology, 87(2), S. 400-413. doi: 10.1111/1365-2656.12709.   
Hall, M. D., Bento, G. und Ebert, D. (2017) «The Evolutionary Consequences of Stepwise Infection Processes», Trends in Ecology & Evolution, 32(8), S. 612-623. doi: 10.1016/j.tree.2017.05.009.   
Mushegian, A. A. und Ebert, D. (2017) «Presence of microbiota reverses the relative performance of Daphnia on two experimental diets», Zoology, 125, S. 29-31.   
Krebs, M., Routtu, J. und Ebert, D. (2017) «QTL mapping of a natural genetic polymorphism for long-term parasite persistence in Daphnia populations», Parasitology, 144(13), S. 1686-1694. doi: 10.1017/s0031182017001032.   
Brun, N. R., Beenakker, M. M. T., Hunting, E. R., Ebert, D. und Vijver, M. G. (2017) «Brood pouch-mediated polystyrene nanoparticle uptake during Daphnia magna embryogenesis», Nanotoxicology, 11(8), S. 1059-1069. doi: 10.1080/17435390.2017.1391344.   
Bento, G., Routtu, J., Fields, P. D., Bourgeois, Y., Du Pasquier, L. und Ebert, D. (2017) «The genetic basis of resistance and matching-allele interactions of a host-parasite system: The Daphnia magna-Pasteuria ramosa model», Plos Genetics, 13(2), S. 2. doi: 100659610.1371/journal.pgen.1006596.   
Orsini, L., Gilbert, D., Podicheti, R., Jansen, M., Brown, J. B., Solari, O. S., Spanier, K. I., Colbourne, J. K., Rusch, D. B., Decaestecker, E., Asselman, J., De Schamphelaere, K. A. C., Ebert, D., Haag, C. R., Kvist, J., Laforsch, C., Petrusek, A., Beckerman, A. P., Little, T. J., Chaturvedi, A., Pfrender, M. E., De Meester, L. und Frilander, M. J. (2017) «Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors (vol 3, 160030, 2016)», Scientific Data, 4, S. 170006. doi: 10.1038/sdata.2016.30.   
Bourgeois, Y., Roulin, A. C., Muller, K. und Ebert, D. (2017) «Parasitism drives host genome evolution: Insights from the Pasteuria ramosa-Daphnia magna system», Evolution, 71(4), S. 1106-1113. doi: 10.1111/evo.13209.   
Duneau, D., Ebert, D. und Du Pasquier, L. (2016) «Infections by Pasteuria do not protect its natural host Daphnia magna from subsequent infections», Developmental and comparative immunology. Elsevier, 57, S. 120-125. doi: 10.1016/j.dci.2015.12.004.   edoc
Roulin, A. C., Bourgeois, Y., Stiefel, U., Walser, J.-C. und Ebert, D. (2016) «A Photoreceptor Contributes to the Natural Variation of Diapause Induction in Daphnia magna», Molecular Biology and Evolution . Oxford University Press, 33(12), S. 3194-3204. doi: 10.1093/molbev/msw200.   edoc
Michel, J., Ebert, D. und Hall, M. D. (2016) «The trans-generational impact of population density signals on host-parasite interactions», BMC Evolutionary Biology. BioMed Central, 16(1), S. 254. doi: 10.1186/s12862-016-0828-4.   edoc
Retnaningdyah, C. und Ebert, D. (2016) «Bleach Solution Requirement for Hatching of Daphnia magna Resting Eggs», Journal of Tropical Life Science. University of Brawijaya, 6, S. 136-141. doi: 10.11594/jtls.06.03.0.   edoc | Open Access
Arbore, R., Andras, J. P., Routtu, J. und Ebert, D. (2016) «Ecological genetics of sediment browsing behaviour in a planktonic crustacean», Journal of Evolutionary Biology. Wiley, 29(10), S. 1999-2009. doi: 10.1111/jeb.12923.   edoc
Altermatt, F. und Ebert, D. (2016) «Reduced flight-to-light behaviour of moth populations exposed to long-term urban light pollution», Biology Letters. The Royal Society, 12(4), S. 20160111. doi: 10.1098/rsbl.2016.0111.   edoc
Metzger, C. M. J. A., Luijckx, P., Bento, G., Mariadassou, M. und Ebert, D. (2016) «The Red Queen lives: Epistasis between linked resistance loci», Evolution. Blackwell, 70(2), S. 480-487. doi: 10.1111/evo.12854.   edoc
Mushegian, A. A., Burcklen, E., Schär, T. M. M. und Ebert, D. (2016) «Temperature-dependent benefits of bacterial exposure in embryonic development of Daphnia magna resting eggs», Journal of Experimental Biology . Company of Biologists, 219(6), S. 897-904. doi: 10.1242/jeb.134759.   edoc | Open Access
Rabajante, J. F., Tubay, J. M., Ito, H., Uehara, T., Kakishima, S., Morita, S., Yoshimura, J. und Ebert, D. (2016) «Host-parasite Red Queen dynamics with phase-locked rare genotypes», Science Advances. American Association for the Advancement of Science, 2(3), S. e1501548. doi: 10.1126/sciadv.1501548.   edoc | Open Access
Ebert, D., Duneau, D., Hall, M. D., Luijckx, P., Andras, J. P., Du Pasquier, L. und Ben-Ami, F. (2016) «A Population Biology Perspective on the Stepwise Infection Process of the Bacterial Pathogen Pasteuria ramosa in Daphnia», Advances in Parasitology . Elsevier, 91, S. 265-310. doi: 10.1016/bs.apar.2015.10.001.   edoc
Orsini, L., Gilbert, D., Podicheti, R., Jansen, M., Brown, J. B., Solari, O. S., Spanier, K. I., Colbourne, J. K., Rush, D., Decaestecker, E., Asselman, J., De Schamphelaere, K. A. C., Ebert, D., Haag, C. R., Kvist, J., Laforsch, C., Petrusek, A., Beckerman, A. P., Little, T. J., Chaturvedi, A., Pfrender, M. E., De Meester, L. und Frilander, M. J. (2016) «Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors», Scientific Data. Springer Nature, 3, S. 160030. doi: 10.1038/sdata.2016.30.   edoc | Open Access
Schlotz, N., Roulin, A., Ebert, D. und Martin-Creuzburg, D. (2016) «Combined effects of dietary polyunsaturated fatty acids and parasite exposure on eicosanoid-related gene expression in an invertebrate model», Comparative Biochemistry and Physiology, Part A: Molecular and Integrative Physiology. Elsevier, 201, S. 115-123. doi: 10.1016/j.cbpa.2016.07.008.   edoc
Dukić, M., Berner, D., Roesti, M., Haag, C. R. und Ebert, D. (2016) «A high-density genetic map reveals variation in recombination rate across the genome of Daphnia magna», BMC genetics, 17(1), S. 137. doi: 10.1186/s12863-016-0445-7.   edoc | Open Access
Mushegian, A. A. und Ebert, D. (2016) «Rethinking ‹mutualism› in diverse host-symbiont communities», Bioessays. The Company of Biologists, 38(1), S. 100-108. doi: 10.1002/bies.201500074.   edoc
Lange, B., Kaufmann, A. P. und Ebert, D. (2015) «Genetic, ecological and geographic covariables explaining host range and specificity of a microsporidian parasite», The journal of animal ecology. Blackwell Science, 84(6), S. 1711-1719. doi: 10.1111/1365-2656.12421.   edoc
Roulin, A. C., Mariadassou, M., Hall, M. D., Walser, J.-C., Haag, C. und Ebert, D. (2015) «High genetic variation in resting-stage production in a metapopulation: Is there evidence for local adaptation?», Evolution. Blackwell, 69(10), S. 2747-2756. doi: 10.1111/evo.12770.   edoc
Fields, P. D., Reisser, C., Dukić, M., Haag, C. R. und Ebert, D. (2015) «Genes mirror geography in Daphnia magna», Molecular ecology. Blackwell, 24(17), S. 4521-4536. doi: 10.1111/mec.13324.   edoc
Mariadassou, M., Pichon, S. und Ebert, D. (2015) «Microbial ecosystems are dominated by specialist taxa», Ecology letters. Blackwell, S. 974-982. doi: 10.1111/ele.12478.   edoc
Rabajante, J. F., Tubay, J. M., Uehara, T., Morita, S., Ebert, D. und Yoshimura, J. (2015) «Red Queen dynamics in multi-host and multi-parasite interaction system», Scientific Reports. Nature Publishing Group, 5, S. 10004. doi: 10.1038/srep10004.   edoc
Clerc, M., Ebert, D. und Hall, M. D. (2015) «Expression of parasite genetic variation changes over the course of infection: implications of within-host dynamics for the evolution of virulence», Proceedings of the Royal Society. Series B, Biological sciences. The Royal Society, 282(1804), S. 20142820. doi: 10.1098/rspb.2014.2820.   edoc
Pombert, J.-F., Haag, K. L., Beidas, S., Ebert, D. und Keeling, P. J. (2015) «The Ordospora colligata genome: Evolution of extreme reduction in microsporidia and host-to-parasite horizontal gene transfer», mBio. American Society for Microbiology, 6(1), S. e02400-14. doi: 10.1128/mBio.02400-14.   edoc
Routtu, J. und Ebert, D. (2015) «Genetic architecture of resistance in Daphnia hosts against two species of host-specific parasites», Heredity. Nature Publishing Group, 114(2), S. 241-248. doi: 10.1038/hdy.2014.97.   edoc