Publications

Svardal, H., Salzburger, W. and Malinsky, M. (2021) “Genetic Variation and Hybridization in Evolutionary Radiations of Cichlid Fishes”, Annual Review of Animal Biosciences. Annual Reviews, 9, pp. 55–79. doi: 10.1146/annurev-animal-061220-023129.   edoc | Open Access
Ronco, F., Matschiner, M., Boehne, A., Attrid, Boila, A., Buescher, H. H., El Tahimed, Indermaur, A., Malinsky, M., Ricci, V., Kahmen, A., Jentoft, S. and Salzburger, W. (2021) “Drivers and dynamics of a massive adaptive radiation in cichlid fishes”, NATURE. NATURE RESEARCH, 589, pp. 76–81(2021). doi: 10.1038/s41586-020-2930-4.
Svardal, H., Quah, F. X., Malinsky, M., Ngatunga, B. P., Miska, E. A., Salzburger, W., Genner, M. J., Turner, G. F. and Durbin, R. (2020) “Ancestral Hybridization Facilitated Species Diversification in the Lake Malawi Cichlid Fish Adaptive Radiation”, Molecular biology and evolution. Oxford University Press, 37(4), pp. 1100–1113. doi: 10.1093/molbev/msz294.   edoc | Open Access
Bose, A. P. H., Windorfer, J., Böhm, A., Ronco, F., Indermaur, A., Salzburger, W. and Jordan, A. (2020) “Structural manipulations of a shelter resource reveal underlying preference functions in a shell-dwelling cichlid fish”, Proceedings of the Royal Society B: Biological Sciences. The Royal Society Publishing, 287(1927). doi: 10.1098/rspb.2020.0127.   edoc | Open Access
Widmer, L., Indermaur, A., Egger, B. and Salzburger, W. (2020) “Where Am I? Niche constraints due to morphological specialization in two Tanganyikan cichlid fish species”, Ecology and evolution. Wiley, 10(17), pp. 9410–9418. doi: 10.1002/ece3.6629.   edoc | Open Access
Ronco, F., Büscher, H. H., Indermaur, A. and Salzburger, W. (2020) “The taxonomic diversity of the cichlid fish fauna of ancient Lake Tanganyika, East Africa”, Journal of Great Lakes research. Elsevier, 46(5), pp. 1067–1078. doi: 10.1016/j.jglr.2019.05.009.   edoc | Open Access
Rajkov, J., El Taher, A., Böhne, A., Salzburger, W. and Egger, B. (2020) “Gene expression remodelling and immune response during adaptive divergence in an African cichlid fish”, Molecular Ecology. Wiley, 30, pp. 274–296. doi: 10.1111/mec.15709.   edoc | Open Access
Matschiner, M., Böhne, A., Ronco, F. and Salzburger, W. (2020) “The genomic timeline of cichlid fish diversification across continents”, Nature communications. Nature Research, 11(1), p. 5895. doi: 10.1038/s41467-020-17827-9.   edoc
Ronco, F., Matschiner, M., Böhne, A., Boila, A., Büscher, H. H., El Taher, A., Indermaur, A., Malinsky, M., Ricci, V., Kahmen, A., Jentoft, S. and Salzburger, W. (2020) “Drivers and dynamics of a massive adaptive radiation in cichlid fishes”, Nature. Springer nature, 589, pp. 86–81. doi: 10.1038/s41586-020-2930-4.   edoc
El Taher, A., Böhne, A., Boileau, N., Ronco, F., Indermaur, A., Widmer, L. and Salzburger, W. (2020) “Gene expression dynamics during rapid organismal diversification in African cichlid fishes”, Nature ecology & evolution. Springer nature, pp. 10.1038/s41559–020. doi: 10.1038/s41559-020-01354-3.   edoc
Schnitzler, A. ., Granado, J., Putelat, O., Arbogast, R.-M., Drucker, D., Eberhard, A., Schmutz, A., Klaefiger , Y. ., Lang, G., Salzburger, W., Schibler, J., Schlumbaum, A. and Bocherens, H. (2019) “Genetic diversity, genetic structure and diet of ancient and contemporary red deer (Cervus elaphus L.) from north-eastern France”, PloS one. Public Library of Science, 13(1), p. e0189278. doi: 10.1371/journal.pone.0189278.   edoc
Ronco, F., Roesti, M. and Salzburger, W. (2019) “A functional trade-off between trophic adaptation and parental care predicts sexual dimorphism in cichlid fish”, Proceedings. Biological sciences, 286(1909), p. 20191050. doi: 10.1098/rspb.2019.1050.   edoc
Meyer, B. S., Hablützel, P. I., Roose, A. K., Hofmann, M. J., Salzburger, W. and Raeymaekers, J. A. M. (2019) “An exploration of the links between parasites, trophic ecology, morphology, and immunogenetics in the Lake Tanganyika cichlid radiation”, Hydrobiologia, 832(1), pp. 215–233. doi: 10.1007/s10750-018-3798-2.   edoc
Baldo, L., Riera, J. L., Salzburger, W. and Barluenga, M. (2019) “Phylogeography and Ecological Niche Shape the Cichlid Fish Gut Microbiota in Central American and African Lakes”, Frontiers in microbiology, 10, p. 2372. doi: 10.3389/fmicb.2019.02372.   edoc
Svardal, H., Quah, F. X., Malinsky, M., Ngatunga, B. P., Miska, E. A., Salzburger, W., Genner, M. J., Turner, G. F. and Durbin, R. (2019) “Ancestral hybridisation facilitated species diversification in the Lake Malawi cichlid fish adaptive radiation”, Molecular biology and evolution, pp. 1–10. doi: 10.1093/molbev/msz294.   edoc
Musilova, Z., Indermaur, A., Bitja-Nyom, A. R., Omelchenko, D., Kłodawska, M., Albergati, L., Remišová, K. and Salzburger, W. (2019) “Evolution of the visual sensory system in cichlid fishes from crater lake Barombi Mbo in Cameroon”, Molecular ecology, 28(23), pp. 5010–5031. doi: 10.1111/mec.15217.   edoc
Matschiner, M. and Salzburger, W. (2019) “Evolution: Genomic Signatures of Mimicry and Mimicry of Genomic Signatures”, Current biology : CB, 29(10), pp. R363-R365. doi: 10.1016/j.cub.2019.04.015.   edoc
Widmer, L., Heule, E., Colombo, M., Rueegg, A., Indermaur, A., Ronco, F. and Salzburger, W. (2019) “Point-Combination Transect (PCT): Incorporation of small underwater cameras to study fish communities”, Methods in ecology and evolution, 10(6), pp. 891–901. doi: 10.1111/2041-210X.13163.   edoc
Musilova, Z., Cortesi, F., Matschiner, M., Davies, W. I. L., Patel, J. S., Stieb, S. M., de Busserolles, F., Malmstrøm, M., Tørresen, O. K., Brown, C. J., Mountford, J. K., Hanel, R., Stenkamp, D. L., Jakobsen, K. S., Carleton, K. L., Jentoft, S., Marshall, J. and Salzburger, W. (2019) “Vision using multiple distinct rod opsins in deep-sea fishes”, Science (New York, N.Y.), 364(6440), pp. 588–592. doi: 10.1126/science.aav4632.   edoc
Böhne, A., Weber, A. A.-T., Rajkov, J., Rechsteiner, M., Riss, A., Egger, B. and Salzburger, W. (2019) “Repeated Evolution Versus Common Ancestry: Sex Chromosome Evolution in the Haplochromine Cichlid Pseudocrenilabrus philander”, Genome biology and evolution, 11(2), pp. 439–458. doi: 10.1093/gbe/evz003.   edoc
Ceballos, S. G., Roesti, M., Matschiner, M., Fernández, D. A., Damerau, M., Hanel, R. and Salzburger, W. (2019) “Phylogenomics of an extra-Antarctic notothenioid radiation reveals a previously unrecognized lineage and diffuse species boundaries”, BMC evolutionary biology, 19(1), p. 13. doi: 10.1186/s12862-019-1345-z.   edoc
El Taher, A., Lichilín, N., Salzburger, W. and Böhne, A. (2019) “Time matters! Developmental shift in gene expression between the head and the trunk region of the cichlid fish Astatotilapia burtoni”, BMC genomics, 20(1), p. 39. doi: 10.1186/s12864-018-5321-6.   edoc
Rajkov, J., Weber, A. A.-T., Salzburger, W. and Egger, B. (2018) “Adaptive phenotypic plasticity contributes to divergence between lake and river populations of an East African cichlid fish”, Ecology and evolution, 8(15), pp. 7323–7333. doi: 10.1002/ece3.4241.   edoc
Salzburger, W. (2018) “Understanding explosive diversification through cichlid fish genomics”, Nature reviews. Genetics, 19(11), pp. 705–717. doi: 10.1038/s41576-018-0043-9.   edoc
Indermaur, A., Theis, A., Egger, B. and Salzburger, W. (2018) “Mouth dimorphism in scale-eating cichlid fish from Lake Tanganyika advances individual fitness”, Evolution; international journal of organic evolution, 72(9), pp. 1962–1969. doi: 10.1111/evo.13552.   edoc
Pauquet, G., Salzburger, W. and Egger, B. (2018) “The puzzling phylogeography of the haplochromine cichlid fish Astatotilapia burtoni”, Ecology and evolution, 8(11), pp. 5637–5648. doi: 10.1002/ece3.4092.   edoc
Schnitzler, A., Granado, J., Putelat, O., Arbogast, R.-M., Drucker, D., Eberhard, A., Schmutz, A., Klaefiger, Y., Lang, G., Salzburger, W., Schibler, J., Schlumbaum, A. and Bocherens, H. (2018) “Correction: Genetic diversity, genetic structure and diet of ancient and contemporary red deer (Cervus elaphus L.) from north-eastern France”, PloS one, 13(6), p. e0199945. doi: 10.1371/journal.pone.0199945.   edoc
Malmstrøm, M., Britz, R., Matschiner, M., Tørresen, O. K., Hadiaty, R. K., Yaakob, N., Tan, H. H., Jakobsen, K. S., Salzburger, W. and Rüber, L. (2018) “The Most Developmentally Truncated Fishes Show Extensive Hox Gene Loss and Miniaturized Genomes”, Genome biology and evolution, 10(4), pp. 1088–1103. doi: 10.1093/gbe/evy058.   edoc
Muschick, M. and Salzburger, W. (2018) “Evolution: An Archipelago Replete with Replicates”, Current biology : CB, 28(9), pp. R565-R567. doi: 10.1016/j.cub.2018.03.032.   edoc
Stange, M., Aguirre-Fernández, G., Salzburger, W. and Sánchez-Villagra, M. R. (2018) “Study of morphological variation of northern Neotropical Ariidae reveals conservatism despite macrohabitat transitions”, BMC evolutionary biology, 18(1), p. 38. doi: 10.1186/s12862-018-1152-y.   edoc
Stange, M., Sánchez-Villagra, M. R., Salzburger, W. and Matschiner, M. (2018) “Bayesian Divergence-Time Estimation with Genome-Wide Single-Nucleotide Polymorphism Data of Sea Catfishes (Ariidae) Supports Miocene Closure of the Panamanian Isthmus”, Systematic biology, 67(4), pp. 681–699. doi: 10.1093/sysbio/syy006.   edoc
Keller, I. S., Bayer, T., Salzburger, W. and Roth, O. (2018) “Effects of parental care on resource allocation into immune defense and buccal microbiota in mouthbrooding cichlid fishes”, Evolution; international journal of organic evolution, 72(5), pp. 1109–1123. doi: 10.1111/evo.13452.   edoc
Baalsrud, H. T., Torresen, O. K., Solbakken, M. H., Salzburger, W., Hanel, R., Jakobsen, K. S. and Jentoft, S. (2018) “De Novo Gene Evolution of Antifreeze Glycoproteins in Codfishes Revealed by Whole Genome Sequence Data”, MOLECULAR BIOLOGY AND EVOLUTION. OXFORD UNIV PRESS, 35(3), pp. 593–606. doi: 10.1093/molbev/msx311.   edoc
Rajkov, J., Weber, A. A.-T., Salzburger, W. and Egger, B. (2018) “Immigrant and extrinsic hybrid inviability contribute to reproductive isolation between lake and river cichlid ecotypes”, Evolution: international journal of organic evolution. Wiley, 72(11), pp. 2553–2564. doi: 10.1111/evo.13612.   edoc
Spinks, R. K., Muschick, M., Salzburger, W. and Gante, H. F. (2017) “Singing above the chorus: cooperative Princess cichlid fish (Neolamprologus pulcher) has high pitch”, Hydrobiologia. Springer, 791, pp. 115–125. doi: 10.1007/s10750-016-2921-5.   edoc
Bachmann, J. C., Cortesi, F., Hall, M. D., Marshall, N. J., Salzburger, W. and Gante, H. F. (2017) “Real-time social selection maintains honesty of a dynamic visual signal in cooperative fish”, Evolution Letters. Wiley, 1(5), pp. 269–278. doi: 10.1002/evl3.24 .   edoc | Open Access
Stieb, S. M., Cortesi, F., Sueess, L., Carleton, K. L., Salzburger, W. and Marshall, N. J. (2017) “Why UV vision and red vision are important for damselfish (Pomacentridae): structural and expression variation in opsin genes”, Molecular Ecology. Wiley, 26(5), pp. 1323–1342. doi: 10.1111/mec.13968.   edoc
Theis, A., Roth, O., Cortesi, F., Ronco, F., Salzburger, W. and Egger, B. (2017) “Variation of anal fin egg-spots along an environmental gradient in a haplochromine cichlid fish”, Evolution: International Journal of Organic Evolution. Wiley, 71(3), pp. 766–777. doi: 10.1111/evo.13166.   edoc
Baldo, L., Pretus, J. L., Riera, J. L., Musilova, Z., Bitja Nyom, A. R. and Salzburger, W. (2017) “Convergence of gut microbiotas in the adaptive radiations of African cichlid fishes”, ISME Journal. Nature Publishing Group, 11(9), pp. 1975–1987. doi: 10.1038/ismej.2017.62.   edoc | Open Access
Egger, B., Roesti, M., Böhne, A., Roth, O. and Salzburger, W. (2017) “Demography and genome divergence of lake and stream populations of an East African cichlid fish”, Molecular Ecology. Wiley, 26(19), pp. 5016–5030. doi: 10.1111/mec.14248.   edoc